Initial commit

skills/candlekeep/alembic/README

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+Generic single-database configuration.

skills/candlekeep/alembic/env.py

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+from logging.config import fileConfig
+from pathlib import Path
+import os
+import sys
+
+from sqlalchemy import engine_from_config
+from sqlalchemy import pool
+
+from alembic import context
+
+# Add parent directory to path to import our models
+sys.path.insert(0, str(Path(__file__).parent.parent))
+
+from src.candlekeep.db.models import Base
+
+# this is the Alembic Config object, which provides
+# access to the values within the .ini file in use.
+config = context.config
+
+# Set database URL programmatically
+candlekeep_dir = Path.home() / ".candlekeep"
+db_path = candlekeep_dir / "candlekeep.db"
+config.set_main_option("sqlalchemy.url", f"sqlite:///{db_path}")
+
+# Interpret the config file for Python logging.
+# This line sets up loggers basically.
+if config.config_file_name is not None:
+    fileConfig(config.config_file_name)
+
+# add your model's MetaData object here
+# for 'autogenerate' support
+target_metadata = Base.metadata
+
+# other values from the config, defined by the needs of env.py,
+# can be acquired:
+# my_important_option = config.get_main_option("my_important_option")
+# ... etc.
+
+
+def run_migrations_offline() -> None:
+    """Run migrations in 'offline' mode.
+
+    This configures the context with just a URL
+    and not an Engine, though an Engine is acceptable
+    here as well.  By skipping the Engine creation
+    we don't even need a DBAPI to be available.
+
+    Calls to context.execute() here emit the given string to the
+    script output.
+
+    """
+    url = config.get_main_option("sqlalchemy.url")
+    context.configure(
+        url=url,
+        target_metadata=target_metadata,
+        literal_binds=True,
+        dialect_opts={"paramstyle": "named"},
+    )
+
+    with context.begin_transaction():
+        context.run_migrations()
+
+
+def run_migrations_online() -> None:
+    """Run migrations in 'online' mode.
+
+    In this scenario we need to create an Engine
+    and associate a connection with the context.
+
+    """
+    connectable = engine_from_config(
+        config.get_section(config.config_ini_section, {}),
+        prefix="sqlalchemy.",
+        poolclass=pool.NullPool,
+    )
+
+    with connectable.connect() as connection:
+        context.configure(
+            connection=connection, target_metadata=target_metadata
+        )
+
+        with context.begin_transaction():
+            context.run_migrations()
+
+
+if context.is_offline_mode():
+    run_migrations_offline()
+else:
+    run_migrations_online()

skills/candlekeep/alembic/script.py.mako

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+"""${message}
+
+Revision ID: ${up_revision}
+Revises: ${down_revision | comma,n}
+Create Date: ${create_date}
+
+"""
+from typing import Sequence, Union
+
+from alembic import op
+import sqlalchemy as sa
+${imports if imports else ""}
+
+# revision identifiers, used by Alembic.
+revision: str = ${repr(up_revision)}
+down_revision: Union[str, Sequence[str], None] = ${repr(down_revision)}
+branch_labels: Union[str, Sequence[str], None] = ${repr(branch_labels)}
+depends_on: Union[str, Sequence[str], None] = ${repr(depends_on)}
+
+
+def upgrade() -> None:
+    """Upgrade schema."""
+    ${upgrades if upgrades else "pass"}
+
+
+def downgrade() -> None:
+    """Downgrade schema."""
+    ${downgrades if downgrades else "pass"}

skills/candlekeep/alembic/versions/350115ea15b8_add_table_of_contents_field.py

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+"""add_table_of_contents_field
+
+Revision ID: 350115ea15b8
+Revises: e5ffbf97468e
+Create Date: 2025-11-01 17:03:15.297500
+
+"""
+from typing import Sequence, Union
+
+from alembic import op
+import sqlalchemy as sa
+
+
+# revision identifiers, used by Alembic.
+revision: str = '350115ea15b8'
+down_revision: Union[str, Sequence[str], None] = 'e5ffbf97468e'
+branch_labels: Union[str, Sequence[str], None] = None
+depends_on: Union[str, Sequence[str], None] = None
+
+
+def upgrade() -> None:
+    """Upgrade schema."""
+    # Add table_of_contents JSON column
+    op.add_column('books', sa.Column('table_of_contents', sa.JSON(), nullable=True))
+
+
+def downgrade() -> None:
+    """Downgrade schema."""
+    # Remove table_of_contents column
+    op.drop_column('books', 'table_of_contents')

skills/candlekeep/alembic/versions/e5ffbf97468e_initial_schema.py

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+"""Initial schema
+
+Revision ID: e5ffbf97468e
+Revises: 
+Create Date: 2025-11-01 11:55:11.896876
+
+"""
+from typing import Sequence, Union
+
+from alembic import op
+import sqlalchemy as sa
+
+
+# revision identifiers, used by Alembic.
+revision: str = 'e5ffbf97468e'
+down_revision: Union[str, Sequence[str], None] = None
+branch_labels: Union[str, Sequence[str], None] = None
+depends_on: Union[str, Sequence[str], None] = None
+
+
+def upgrade() -> None:
+    """Upgrade schema."""
+    # ### commands auto generated by Alembic - please adjust! ###
+    op.create_table('books',
+    sa.Column('id', sa.Integer(), autoincrement=True, nullable=False),
+    sa.Column('title', sa.String(length=500), nullable=False),
+    sa.Column('author', sa.String(length=255), nullable=True),
+    sa.Column('original_file_path', sa.String(length=1000), nullable=False),
+    sa.Column('markdown_file_path', sa.String(length=1000), nullable=False),
+    sa.Column('source_type', sa.Enum('PDF', 'MARKDOWN', name='sourcetype'), nullable=False),
+    sa.Column('file_hash', sa.String(length=64), nullable=False),
+    sa.Column('added_date', sa.DateTime(), nullable=False),
+    sa.Column('modified_date', sa.DateTime(), nullable=False),
+    sa.Column('pdf_creation_date', sa.DateTime(), nullable=True),
+    sa.Column('pdf_mod_date', sa.DateTime(), nullable=True),
+    sa.Column('pdf_creator', sa.String(length=255), nullable=True),
+    sa.Column('pdf_producer', sa.String(length=255), nullable=True),
+    sa.Column('page_count', sa.Integer(), nullable=True),
+    sa.Column('word_count', sa.Integer(), nullable=True),
+    sa.Column('chapter_count', sa.Integer(), nullable=True),
+    sa.Column('subject', sa.String(length=500), nullable=True),
+    sa.Column('keywords', sa.Text(), nullable=True),
+    sa.Column('category', sa.String(length=100), nullable=True),
+    sa.Column('tags', sa.JSON(), nullable=True),
+    sa.Column('isbn', sa.String(length=20), nullable=True),
+    sa.Column('publisher', sa.String(length=255), nullable=True),
+    sa.Column('publication_year', sa.Integer(), nullable=True),
+    sa.Column('language', sa.String(length=10), nullable=True),
+    sa.PrimaryKeyConstraint('id'),
+    sa.UniqueConstraint('file_hash')
+    )
+    op.create_index(op.f('ix_books_author'), 'books', ['author'], unique=False)
+    op.create_index(op.f('ix_books_category'), 'books', ['category'], unique=False)
+    op.create_index(op.f('ix_books_source_type'), 'books', ['source_type'], unique=False)
+    op.create_index(op.f('ix_books_title'), 'books', ['title'], unique=False)
+    op.create_table('book_notes',
+    sa.Column('id', sa.Integer(), autoincrement=True, nullable=False),
+    sa.Column('book_id', sa.Integer(), nullable=False),
+    sa.Column('note_type', sa.Enum('SUMMARY', 'REVIEW', 'TAG', 'OTHER', name='notetype'), nullable=False),
+    sa.Column('content', sa.Text(), nullable=False),
+    sa.Column('created_date', sa.DateTime(), nullable=False),
+    sa.ForeignKeyConstraint(['book_id'], ['books.id'], ondelete='CASCADE'),
+    sa.PrimaryKeyConstraint('id')
+    )
+    op.create_index('idx_book_type', 'book_notes', ['book_id', 'note_type'], unique=False)
+    # ### end Alembic commands ###
+
+
+def downgrade() -> None:
+    """Downgrade schema."""
+    # ### commands auto generated by Alembic - please adjust! ###
+    op.drop_index('idx_book_type', table_name='book_notes')
+    op.drop_table('book_notes')
+    op.drop_index(op.f('ix_books_title'), table_name='books')
+    op.drop_index(op.f('ix_books_source_type'), table_name='books')
+    op.drop_index(op.f('ix_books_category'), table_name='books')
+    op.drop_index(op.f('ix_books_author'), table_name='books')
+    op.drop_table('books')
+    # ### end Alembic commands ###