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skills/venue-templates/assets/grants/nih_specific_aims.tex
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skills/venue-templates/assets/grants/nih_specific_aims.tex
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% NIH Specific Aims Page Template
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% THE MOST CRITICAL PAGE OF YOUR NIH PROPOSAL
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% 1 page maximum - strictly enforced
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% Last updated: 2024
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\documentclass[11pt,letterpaper]{article}
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% Formatting
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\usepackage[margin=0.5in]{geometry} % 0.5 inch minimum margins
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\usepackage{helvet} % Arial-like font
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\renewcommand{\familydefault}{\sfdefault}
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\usepackage{setspace}
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\usepackage{color}
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\usepackage{soul} % For highlighting (remove in final version)
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% Remove page numbers (optional)
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\pagestyle{empty}
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\begin{document}
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% Optional: Highlight template text to remind yourself to replace
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% Remove \hl{} and color in final version
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\definecolor{highlight}{RGB}{255,255,200}
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\sethlcolor{highlight}
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% ====================
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% SPECIFIC AIMS PAGE
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% ====================
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\begin{center}
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\textbf{\large Your Project Title Here: Concise and Descriptive}
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\end{center}
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\vspace{0.3cm}
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% OPENING PARAGRAPH: The Hook and Gap
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% 2-3 sentences establishing significance and the knowledge gap
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\textbf{[Disease/condition]} affects \textbf{[number]} people worldwide and results in \textbf{[burden: mortality, morbidity, cost]}. \textbf{[Current treatment/understanding]} has improved outcomes, but \textbf{[limitation/gap]} remains a critical barrier to \textbf{[desired outcome]}. Understanding \textbf{[specific mechanism/relationship]} is essential for \textbf{[future advance: therapy, prevention, diagnosis]}.
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\vspace{0.2cm}
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% LONG-TERM GOAL
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% 1 sentence on your overarching research vision
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Our \textbf{long-term goal} is to \textbf{[overarching vision: develop cure, understand mechanism, improve treatment]} for \textbf{[disease/population]}.
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\vspace{0.2cm}
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% OBJECTIVE AND CENTRAL HYPOTHESIS
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% 1-2 sentences on what THIS proposal will accomplish
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The \textbf{objective} of this proposal is to \textbf{[specific objective for this project]}. Our \textbf{central hypothesis} is that \textbf{[clearly stated, testable hypothesis]}.
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\vspace{0.2cm}
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% RATIONALE
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% 2-3 sentences explaining WHY you expect success (preliminary data!)
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This hypothesis is based on our \textbf{preliminary data} showing that \textbf{[key preliminary finding 1]} and \textbf{[key preliminary finding 2]}. These findings suggest that \textbf{[mechanistic explanation or expected outcome]}.
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\vspace{0.2cm}
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% TRANSITION TO AIMS
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% 1 sentence introducing the specific aims
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To test this hypothesis and achieve our objective, we will pursue the following \textbf{Specific Aims}:
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\vspace{0.3cm}
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% ====================
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% SPECIFIC AIM 1
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% ====================
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\noindent\textbf{Specific Aim 1: [Concise, active verb title describing what you'll do].}
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\textit{Working Hypothesis:} \hl{State testable hypothesis for this aim.}
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We will \textbf{[approach/method]} to determine \textbf{[what you'll learn]}. We will use \textbf{[model system/approach]} to test whether \textbf{[specific prediction]}.
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\textbf{Expected Outcome:} We expect to find that \textbf{[predicted result]}. This outcome will demonstrate that \textbf{[significance of finding]} and will be \textbf{[positive/negative/innovative/transformative]} because \textbf{[why it matters]}.
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\vspace{0.3cm}
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% ====================
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% SPECIFIC AIM 2
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% ====================
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\noindent\textbf{Specific Aim 2: [Title of second aim].}
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\textit{Working Hypothesis:} \hl{Testable hypothesis for Aim 2.}
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Building on Aim 1, we will \textbf{[approach]} to \textbf{[objective]}. We will employ \textbf{[method/technique]} in \textbf{[model/population]} to test the hypothesis that \textbf{[specific prediction]}.
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\textbf{Expected Outcome:} These studies will reveal \textbf{[predicted finding]}. This is significant because \textbf{[impact on field/understanding]}.
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\vspace{0.3cm}
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% ====================
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% SPECIFIC AIM 3 (OPTIONAL)
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% ====================
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\noindent\textbf{Specific Aim 3: [Title of third aim].}
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\textit{Working Hypothesis:} \hl{Testable hypothesis for Aim 3.}
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To translate findings from Aims 1-2, we will \textbf{[approach]} to determine \textbf{[translational objective]}. We will \textbf{[method]} using \textbf{[clinically relevant model/patient samples]} to test whether \textbf{[translational prediction]}.
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\textbf{Expected Outcome:} We anticipate that \textbf{[result]}, which will provide \textbf{[proof-of-concept/validation/mechanism]} for \textbf{[therapeutic/diagnostic/preventive strategy]}.
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\vspace{0.3cm}
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% ====================
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% PAYOFF PARAGRAPH
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% ====================
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% 2-3 sentences on IMPACT, INNOVATION, and FUTURE DIRECTIONS
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\textbf{Impact and Innovation:} This project is \textbf{innovative} because it \textbf{[novel aspect: new concept, method, approach, application]}. The proposed research is \textbf{significant} because it will \textbf{[advance the field by...]} and will ultimately lead to \textbf{[long-term impact: improved treatment, new therapeutic target, diagnostic tool]}. Upon completion of these studies, we will be positioned to \textbf{[next steps: clinical trial, mechanistic studies, therapeutic development]}.
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\vspace{0.5cm}
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% ====================
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% ALTERNATIVE STRUCTURE (if preferred)
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% ====================
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% Some successful Specific Aims pages use this alternative structure:
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% - Open with hook (same as above)
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% - State long-term goal and objective (same)
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% - Present central hypothesis with 2-3 supporting pieces of preliminary data
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% - Then state: "We will test this hypothesis through three Specific Aims:"
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% - List aims more concisely (1-2 sentences each, plus expected outcome)
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% - Conclude with payoff paragraph emphasizing innovation, significance, impact
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\end{document}
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% ====================
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% TIPS FOR WRITING SPECIFIC AIMS
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% ====================
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% 1. START WITH A HOOK
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% - Open with the big picture: disease burden, societal cost, mortality
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% - Use compelling statistics
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% - Make it clear why anyone should care
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% 2. IDENTIFY THE GAP
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% - What's currently known?
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% - What's the critical barrier or unknown?
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% - Why does it matter?
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% 3. STATE YOUR HYPOTHESIS EXPLICITLY
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% - Clear, testable hypothesis
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% - Not "We hypothesize that we will study..." (that's not a hypothesis!)
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% - "We hypothesize that [mechanism] causes [outcome]"
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% 4. SHOW PRELIMINARY DATA
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% - Demonstrate feasibility
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% - Prove you're not starting from scratch
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% - Build confidence in your approach
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% 5. THREE AIMS (TYPICALLY)
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% - Can be 2 or 4, but 3 is most common
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% - Aims should be related but somewhat independent
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% - Failure of one aim shouldn't sink the whole project
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% - Aims can build on each other (Aim 1 → Aim 2 → Aim 3)
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% 6. EACH AIM SHOULD HAVE:
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% - Clear title (active verb)
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% - Working hypothesis
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% - Approach/method
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% - Expected outcome
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% - Significance/impact
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% 7. END WITH PAYOFF
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% - Innovation: What's new/different?
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% - Significance: Why does it matter?
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% - Impact: What will change?
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% - Future: Where does this lead?
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% 8. COMMON MISTAKES TO AVOID
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% - Too much background (this is not a mini-review)
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% - Vague hypotheses or objectives
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% - Missing expected outcomes
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% - No preliminary data mentioned
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% - Too ambitious (can't do it all in 5 years)
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% - Not addressing innovation and significance
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% - Poor logical flow between aims
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% - Exceeding 1 page (auto-reject!)
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% 9. FORMATTING RULES (STRICTLY ENFORCED)
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% - 1 page maximum (including all text, no figures typically)
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% - Arial 11pt minimum (or equivalent)
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% - 0.5 inch margins minimum
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% - Any spacing (single, 1.5, double acceptable)
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% - No smaller fonts allowed (even for superscripts/subscripts)
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% 10. REVISION STRATEGY
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% - Write, get feedback, revise 10+ times
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% - Every word must earn its place
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% - Test on non-specialist colleagues
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% - Read aloud to check flow
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% - Have it reviewed by successful R01 holders
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% - Mock study section review
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% ====================
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% EXAMPLES OF STRONG OPENING SENTENCES
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% ====================
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% DISEASE BURDEN APPROACH:
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% "Alzheimer's disease (AD) affects 6.7 million Americans and will cost $345 billion in 2023,
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% yet no disease-modifying therapies exist."
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% MECHANISTIC GAP APPROACH:
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% "Despite decades of research, the molecular mechanisms driving metastasis remain poorly understood,
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% limiting our ability to develop effective therapies for the 90% of cancer deaths caused by metastatic disease."
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% TRANSLATIONAL APPROACH:
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% "Current immunotherapies fail in 70% of patients with melanoma, largely because we cannot predict
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% who will respond, highlighting an urgent need for biomarkers of treatment response."
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% ====================
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% REMEMBER
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% ====================
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% The Specific Aims page is often the ONLY page reviewers read carefully before
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% forming their initial opinion. A weak Specific Aims page can doom an otherwise
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% excellent proposal. Invest the time to make it compelling, clear, and concise.
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% Get feedback from:
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% - Successful R01 awardees in your field
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% - Grant writing office at your institution
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% - Colleagues who've served on NIH study sections
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% - Non-specialists (if they can't understand it, reviewers may struggle too)
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375
skills/venue-templates/assets/grants/nsf_proposal_template.tex
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skills/venue-templates/assets/grants/nsf_proposal_template.tex
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% NSF Research Proposal Template
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% For NSF Standard Grant Proposals
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% Last updated: 2024
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% Based on NSF PAPPG (Proposal & Award Policies & Procedures Guide)
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\documentclass[11pt,letterpaper]{article}
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% Required formatting
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\usepackage[margin=1in]{geometry} % 1 inch margins required
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\usepackage{times} % Times Roman font (11pt minimum)
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\usepackage{graphicx}
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\usepackage{amsmath}
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\usepackage{amssymb}
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\usepackage{cite}
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\usepackage{hyperref}
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% Single spacing (NSF allows single spacing)
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\usepackage{setspace}
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\singlespacing
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% Page numbers
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\usepackage{fancyhdr}
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\pagestyle{fancy}
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\fancyhf{}
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\rhead{\thepage}
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\renewcommand{\headrulewidth}{0pt}
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\begin{document}
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% ====================
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% PROJECT SUMMARY (1 page maximum)
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% ====================
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\section*{Project Summary}
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\subsection*{Overview}
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Provide a concise 1-2 paragraph description of the proposed research. This should be understandable to a scientifically literate reader who is not a specialist in your field.
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\subsection*{Intellectual Merit}
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Describe how the project advances knowledge within its field and across different fields. Address:
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\begin{itemize}
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\item How the project advances understanding in the field
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\item Innovative aspects of the research
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\item Qualifications of the research team
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\item Adequacy of resources
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\end{itemize}
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\subsection*{Broader Impacts}
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Describe the potential benefits to society and contributions to desired societal outcomes. Address one or more of the following:
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\begin{itemize}
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\item Advancing discovery and understanding while promoting teaching and learning
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\item Broadening participation of underrepresented groups in STEM
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\item Disseminating broadly to enhance scientific and technological understanding
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\item Benefits to society (economic development, health, quality of life, national security, etc.)
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\item Developing the scientific workforce and enhancing research infrastructure
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\end{itemize}
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\newpage
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% ====================
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% PROJECT DESCRIPTION (15 pages maximum)
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% ====================
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\section*{Project Description}
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\section{Introduction and Background}
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\subsection{Current State of Knowledge}
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Provide context for your proposed research. Review relevant literature and establish what is currently known in the field.
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\subsection{Knowledge Gap}
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Clearly identify the gap in current knowledge or understanding that your project will address. Explain why this gap is significant.
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\subsection{Preliminary Work and Feasibility}
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Describe any preliminary work that demonstrates the feasibility of your approach. Highlight your team's qualifications and prior accomplishments.
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\section{Research Objectives and Hypotheses}
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\subsection{Overall Goal}
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State the overarching long-term goal of your research program.
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\subsection{Specific Objectives}
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List 2-4 specific, measurable objectives for this project:
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\begin{enumerate}
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\item \textbf{Objective 1:} Clearly stated objective
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\item \textbf{Objective 2:} Second objective
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\item \textbf{Objective 3:} Third objective
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\end{enumerate}
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\subsection{Hypotheses}
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State your testable hypotheses explicitly.
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\section{Research Plan}
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\subsection{Objective 1: [Title]}
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\subsubsection{Rationale}
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Explain why this objective is important and how it addresses the knowledge gap.
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\subsubsection{Approach and Methods}
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Describe in detail how you will accomplish this objective. Include:
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\begin{itemize}
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\item Experimental design or computational approach
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\item Methods and procedures
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\item Data collection and analysis
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\item Controls and validation
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\end{itemize}
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\subsubsection{Expected Outcomes}
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Describe what results you expect and how they will advance the field.
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\subsubsection{Potential Challenges and Alternatives}
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Identify potential obstacles and describe alternative approaches.
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\subsection{Objective 2: [Title]}
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[Repeat same structure as Objective 1]
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\subsection{Objective 3: [Title]}
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[Repeat same structure as Objective 1]
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\section{Timeline and Milestones}
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Provide a detailed timeline showing when each objective will be addressed:
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\begin{center}
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\begin{tabular}{|l|p{3cm}|p{3cm}|p{3cm}|}
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\hline
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\textbf{Activity} & \textbf{Year 1} & \textbf{Year 2} & \textbf{Year 3} \\
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\hline
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Objective 1 activities & Months 1-6: ... & & \\
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||||
\hline
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||||
Objective 2 activities & Months 7-12: ... & Months 13-18: ... & \\
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||||
\hline
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Objective 3 activities & & Months 19-24: ... & Months 25-36: ... \\
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\hline
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Publications & & Submit paper 1 & Submit papers 2-3 \\
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\hline
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\end{tabular}
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\end{center}
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\section{Broader Impacts}
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\textit{Note: Broader Impacts must be substantive, not perfunctory. Integrate throughout proposal.}
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|
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\subsection{Educational Activities}
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Describe specific educational activities integrated with the research:
|
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\begin{itemize}
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\item Curriculum development
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||||
\item Training of graduate and undergraduate students
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||||
\item K-12 outreach programs
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\item Public science communication
|
||||
\end{itemize}
|
||||
|
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\subsection{Broadening Participation}
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Describe concrete efforts to broaden participation of underrepresented groups:
|
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\begin{itemize}
|
||||
\item Recruitment strategies
|
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\item Mentoring programs
|
||||
\item Partnerships with minority-serving institutions
|
||||
\item Measurable outcomes
|
||||
\end{itemize}
|
||||
|
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\subsection{Dissemination and Outreach}
|
||||
Describe plans for broad dissemination:
|
||||
\begin{itemize}
|
||||
\item Open-access publications
|
||||
\item Data and code sharing (repositories, licenses)
|
||||
\item Conference presentations and workshops
|
||||
\item Public engagement activities
|
||||
\end{itemize}
|
||||
|
||||
\subsection{Societal Benefits}
|
||||
Explain potential benefits to society:
|
||||
\begin{itemize}
|
||||
\item Economic development
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||||
\item Health and quality of life improvements
|
||||
\item Environmental sustainability
|
||||
\item National security (if applicable)
|
||||
\end{itemize}
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|
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\subsection{Assessment of Broader Impacts}
|
||||
Describe how you will measure the success of broader impacts activities. Include specific, measurable outcomes.
|
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|
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\section{Results from Prior NSF Support}
|
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\textit{Required if PI or co-PI has received NSF funding in the past 5 years}
|
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|
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\subsection{Award Title and Number}
|
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Award Number: NSF-XXXXX, Amount: \$XXX,XXX, Period: MM/YY - MM/YY
|
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|
||||
\subsection{Intellectual Merit}
|
||||
Summarize research accomplishments and findings from prior award.
|
||||
|
||||
\subsection{Broader Impacts}
|
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Describe broader impacts activities and outcomes from prior award.
|
||||
|
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\subsection{Publications}
|
||||
List publications resulting from prior NSF support (up to 5 most significant):
|
||||
\begin{enumerate}
|
||||
\item Author, A.A., et al. (Year). Title. \textit{Journal}, vol(issue), pages.
|
||||
\end{enumerate}
|
||||
|
||||
\newpage
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||||
|
||||
% ====================
|
||||
% REFERENCES CITED (No page limit)
|
||||
% ====================
|
||||
|
||||
\section*{References Cited}
|
||||
|
||||
\begin{thebibliography}{99}
|
||||
|
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\bibitem{ref1}
|
||||
Author, A.A., \& Author, B.B. (2023). Article title. \textit{Journal Name}, \textit{45}(3), 123-145.
|
||||
|
||||
\bibitem{ref2}
|
||||
Author, C.C., Author, D.D., \& Author, E.E. (2022). Book title. Publisher.
|
||||
|
||||
\bibitem{ref3}
|
||||
Author, F.F., et al. (2021). Another article. \textit{Nature}, \textit{590}, 234-238.
|
||||
|
||||
% Add more references as needed
|
||||
|
||||
\end{thebibliography}
|
||||
|
||||
\newpage
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||||
|
||||
% ====================
|
||||
% BUDGET JUSTIFICATION (3-5 pages typical)
|
||||
% Note: Budget is submitted separately in NSF's systems
|
||||
% This justifies the budget requests
|
||||
% ====================
|
||||
|
||||
\section*{Budget Justification}
|
||||
|
||||
\subsection*{A. Senior Personnel}
|
||||
\textbf{PI Name (X\% academic year, Y summer months):} Justify percent effort and role in project. Summer salary calculated as X/9 of academic year salary.
|
||||
|
||||
\textbf{Co-PI Name (X\% academic year):} Justify role and effort.
|
||||
|
||||
\subsection*{B. Other Personnel}
|
||||
\textbf{Postdoctoral Researcher (1.0 FTE, Years 1-3):} Justify need for postdoc, qualifications required, and role in project. Salary: \$XX,XXX/year.
|
||||
|
||||
\textbf{Graduate Student (2 students, Years 1-3):} Justify need, training opportunities, and project contributions. Stipend: \$XX,XXX/year per student.
|
||||
|
||||
\textbf{Undergraduate Researchers (2 students/year):} Describe research training opportunities. Hourly wage: \$XX/hour.
|
||||
|
||||
\subsection*{C. Fringe Benefits}
|
||||
List fringe benefit rates for each personnel category as determined by institution.
|
||||
|
||||
\subsection*{D. Equipment (\$5,000+)}
|
||||
\textbf{Instrument Name (\$XX,XXX):} Justify need, explain why existing equipment inadequate, describe how it enables proposed research.
|
||||
|
||||
\subsection*{E. Travel}
|
||||
\textbf{Domestic Conference Travel (\$X,XXX/year):} Justify conference attendance for dissemination (1-2 conferences/year for PI and students).
|
||||
|
||||
\textbf{Field Work Travel (\$X,XXX):} If applicable, justify field site visits.
|
||||
|
||||
\subsection*{F. Participant Support Costs}
|
||||
\textit{If hosting workshop, summer program, etc.}
|
||||
|
||||
Stipends, travel, and per diem for XX participants attending [workshop/program name].
|
||||
|
||||
\subsection*{G. Other Direct Costs}
|
||||
\textbf{Materials and Supplies (\$X,XXX/year):} Itemize major categories (e.g., chemicals, consumables, software licenses).
|
||||
|
||||
\textbf{Publication Costs (\$X,XXX):} Budget for open-access publication fees (estimate X papers @ \$X,XXX each).
|
||||
|
||||
\textbf{Subaward to Partner Institution (\$XX,XXX):} Justify collaboration and subaward amount.
|
||||
|
||||
\textbf{Other:} Justify any other costs.
|
||||
|
||||
\subsection*{H. Indirect Costs}
|
||||
Calculated at XX\% of Modified Total Direct Costs (institution's negotiated rate).
|
||||
|
||||
\newpage
|
||||
|
||||
% ====================
|
||||
% DATA MANAGEMENT PLAN (2 pages maximum)
|
||||
% ====================
|
||||
|
||||
\section*{Data Management Plan}
|
||||
|
||||
\subsection*{Types of Data}
|
||||
Describe the types of data to be generated by the project:
|
||||
\begin{itemize}
|
||||
\item Experimental data (e.g., measurements, observations)
|
||||
\item Computational data (e.g., simulation results, models)
|
||||
\item Metadata describing data collection and processing
|
||||
\end{itemize}
|
||||
|
||||
\subsection*{Data and Metadata Standards}
|
||||
Describe standards to be used for data format and metadata:
|
||||
\begin{itemize}
|
||||
\item File formats (e.g., HDF5, NetCDF, CSV)
|
||||
\item Metadata standards (e.g., Dublin Core, domain-specific standards)
|
||||
\item Documentation of data collection and processing
|
||||
\end{itemize}
|
||||
|
||||
\subsection*{Policies for Access and Sharing}
|
||||
Describe how data will be made accessible:
|
||||
\begin{itemize}
|
||||
\item Repository for data deposition (e.g., Dryad, Zenodo, domain-specific archive)
|
||||
\item Timeline for public release (immediately upon publication, or within X months)
|
||||
\item Access restrictions (if any) and justification
|
||||
\item Embargo periods (if applicable)
|
||||
\end{itemize}
|
||||
|
||||
\subsection*{Policies for Re-use, Redistribution}
|
||||
Describe terms for re-use:
|
||||
\begin{itemize}
|
||||
\item Licensing (e.g., CC0, CC-BY, specific data use agreement)
|
||||
\item Attribution requirements
|
||||
\item Restrictions on commercial use (if any)
|
||||
\end{itemize}
|
||||
|
||||
\subsection*{Plans for Archiving and Preservation}
|
||||
Describe long-term preservation strategy:
|
||||
\begin{itemize}
|
||||
\item Repository selection (long-term, stable repositories)
|
||||
\item Preservation period (minimum 3-5 years post-project)
|
||||
\item Data formats for long-term preservation
|
||||
\item Institutional commitments
|
||||
\end{itemize}
|
||||
|
||||
\subsection*{Roles and Responsibilities}
|
||||
Identify who is responsible for data management implementation.
|
||||
|
||||
\end{document}
|
||||
|
||||
% ====================
|
||||
% ADDITIONAL DOCUMENTS (submitted separately in NSF system)
|
||||
% ====================
|
||||
|
||||
% 1. BIOGRAPHICAL SKETCH (3 pages per person)
|
||||
% - Use NSF-approved format (SciENcv or NSF template)
|
||||
% - Professional preparation
|
||||
% - Appointments
|
||||
% - Products (up to 5 most relevant, up to 5 other significant)
|
||||
% - Synergistic activities
|
||||
|
||||
% 2. CURRENT AND PENDING SUPPORT
|
||||
% - All current and pending support for all senior personnel
|
||||
% - Use NSF format
|
||||
% - Check for overlap with proposed project
|
||||
|
||||
% 3. FACILITIES, EQUIPMENT, AND OTHER RESOURCES
|
||||
% - Describe available facilities and equipment
|
||||
% - Computational resources
|
||||
% - Laboratory space
|
||||
% - Other resources supporting the project
|
||||
|
||||
% ====================
|
||||
% FORMATTING CHECKLIST
|
||||
% ====================
|
||||
|
||||
% ☐ Margins: 1 inch on all sides
|
||||
% ☐ Font: Times Roman 11pt or larger (or equivalent)
|
||||
% ☐ Line spacing: Single spacing acceptable
|
||||
% ☐ Project Summary: 1 page, includes Overview, Intellectual Merit, Broader Impacts
|
||||
% ☐ Project Description: 15 pages maximum
|
||||
% ☐ References Cited: No page limit, consistent formatting
|
||||
% ☐ Biographical Sketches: 3 pages per person, NSF-approved format
|
||||
% ☐ Budget Justification: Detailed and reasonable
|
||||
% ☐ Data Management Plan: 2 pages maximum
|
||||
% ☐ Current & Pending: Complete and accurate
|
||||
% ☐ Facilities: Adequate resources described
|
||||
% ☐ Broader Impacts: Substantive and integrated throughout
|
||||
% ☐ All required sections included
|
||||
|
||||
% ====================
|
||||
% SUBMISSION NOTES
|
||||
% ====================
|
||||
|
||||
% 1. Submit through Research.gov or Grants.gov
|
||||
% 2. Follow your institution's internal deadlines (usually 3-5 days before NSF deadline)
|
||||
% 3. Obtain institutional approval before submission
|
||||
% 4. Ensure all senior personnel have NSF IDs
|
||||
% 5. Budget prepared in NSF's system (separate from this document)
|
||||
% 6. Check program-specific requirements (may differ from standard grant)
|
||||
% 7. Contact Program Officer for guidance (encouraged but not required)
|
||||
|
||||
171
skills/venue-templates/assets/journals/nature_article.tex
Normal file
171
skills/venue-templates/assets/journals/nature_article.tex
Normal file
@@ -0,0 +1,171 @@
|
||||
% Nature Journal Article Template
|
||||
% For submission to Nature family journals
|
||||
% Last updated: 2024
|
||||
|
||||
\documentclass[12pt]{article}
|
||||
|
||||
% Packages
|
||||
\usepackage[margin=2.5cm]{geometry}
|
||||
\usepackage{times}
|
||||
\usepackage{graphicx}
|
||||
\usepackage{amsmath}
|
||||
\usepackage{amssymb}
|
||||
\usepackage{hyperref}
|
||||
\usepackage{lineno} % Line numbers for review
|
||||
\usepackage[super]{natbib} % Superscript citations
|
||||
|
||||
% Line numbering (required for submission)
|
||||
\linenumbers
|
||||
|
||||
% Title and Authors
|
||||
\title{Insert Your Title Here: Concise and Descriptive}
|
||||
|
||||
\author{
|
||||
First Author\textsuperscript{1}, Second Author\textsuperscript{1,2}, Third Author\textsuperscript{2,*}
|
||||
}
|
||||
|
||||
\date{}
|
||||
|
||||
\begin{document}
|
||||
|
||||
\maketitle
|
||||
|
||||
% Affiliations
|
||||
\noindent
|
||||
\textsuperscript{1}Department Name, Institution Name, City, State/Province, Postal Code, Country \\
|
||||
\textsuperscript{2}Second Department/Institution \\
|
||||
\textsuperscript{*}Correspondence: [email protected]
|
||||
|
||||
% Abstract
|
||||
\begin{abstract}
|
||||
\noindent
|
||||
Write a concise abstract of 150-200 words summarizing the main findings, significance, and conclusions of your work. The abstract should be self-contained and understandable without reading the full paper. Focus on what you did, what you found, and why it matters. Avoid jargon and abbreviations where possible.
|
||||
\end{abstract}
|
||||
|
||||
% Main Text
|
||||
\section*{Introduction}
|
||||
% 2-3 paragraphs setting the context
|
||||
Provide background on the research area, establish the importance of the problem, and identify the knowledge gap your work addresses. Nature papers should emphasize broad significance beyond a narrow specialty.
|
||||
|
||||
State your main research question or objective clearly.
|
||||
|
||||
Briefly preview your approach and key findings.
|
||||
|
||||
\section*{Results}
|
||||
% Primary results section
|
||||
% Organize by finding, not by experiment
|
||||
% Reference figures/tables as you describe results
|
||||
|
||||
\subsection*{First major finding}
|
||||
Describe your first key result. Reference Figure~\ref{fig:example} to support your findings.
|
||||
|
||||
\begin{figure}[ht]
|
||||
\centering
|
||||
% Include your figure here
|
||||
% \includegraphics[width=0.7\textwidth]{figure1.pdf}
|
||||
\caption{{\bf Figure title in bold.} Detailed figure caption explaining what is shown, experimental conditions, sample sizes (n), statistical tests, and significance levels. Panels should be labeled (a), (b), etc. if multiple panels are present.}
|
||||
\label{fig:example}
|
||||
\end{figure}
|
||||
|
||||
\subsection*{Second major finding}
|
||||
Describe your second key result objectively, without interpretation.
|
||||
|
||||
\subsection*{Third major finding}
|
||||
Describe additional results as needed.
|
||||
|
||||
\section*{Discussion}
|
||||
% Interpret results, compare to literature, acknowledge limitations
|
||||
|
||||
\subsection*{Main findings and interpretation}
|
||||
Summarize your key findings and explain their significance. How do they advance our understanding?
|
||||
|
||||
\subsection*{Comparison to previous work}
|
||||
Compare and contrast your results with existing literature\cite{example2023}.
|
||||
|
||||
\subsection*{Implications}
|
||||
Discuss the broader implications of your work for the field and beyond.
|
||||
|
||||
\subsection*{Limitations and future directions}
|
||||
Honestly acknowledge limitations and suggest future research directions.
|
||||
|
||||
\section*{Conclusions}
|
||||
Provide a concise conclusion summarizing the main take-home messages of your work.
|
||||
|
||||
\section*{Methods}
|
||||
% Detailed methods allowing reproducibility
|
||||
% Can be placed after main text in Nature
|
||||
|
||||
\subsection*{Experimental design}
|
||||
Describe overall experimental design, including controls.
|
||||
|
||||
\subsection*{Sample preparation}
|
||||
Detail procedures for sample collection, preparation, and handling.
|
||||
|
||||
\subsection*{Data collection}
|
||||
Describe instrumentation, measurement procedures, and data collection protocols.
|
||||
|
||||
\subsection*{Data analysis}
|
||||
Explain analytical methods, statistical tests, and software used. State sample sizes, replication, and significance thresholds.
|
||||
|
||||
\subsection*{Ethical approval}
|
||||
Include relevant ethical approval statements (human subjects, animal use, biosafety).
|
||||
|
||||
\section*{Data availability}
|
||||
State where data supporting the findings can be accessed (repository, supplementary files, available on request).
|
||||
|
||||
\section*{Code availability}
|
||||
If applicable, provide information on code availability (GitHub, Zenodo, etc.).
|
||||
|
||||
\section*{Acknowledgements}
|
||||
Acknowledge funding sources, technical assistance, and other contributions. List grant numbers.
|
||||
|
||||
\section*{Author contributions}
|
||||
Describe contributions of each author using CRediT taxonomy or similar (conceptualization, methodology, investigation, writing, etc.).
|
||||
|
||||
\section*{Competing interests}
|
||||
Declare any financial or non-financial competing interests. If none, state "The authors declare no competing interests."
|
||||
|
||||
% References
|
||||
\bibliographystyle{naturemag} % Nature bibliography style
|
||||
\bibliography{references} % Your .bib file
|
||||
|
||||
% Alternatively, manually format references:
|
||||
\begin{thebibliography}{99}
|
||||
|
||||
\bibitem{example2023}
|
||||
Smith, J. D., Jones, M. L. \& Williams, K. R. Groundbreaking discovery in the field. \textit{Nature} \textbf{600}, 123--130 (2023).
|
||||
|
||||
\bibitem{author2022}
|
||||
Author, A. A. \& Coauthor, B. B. Another important paper. \textit{Nat. Methods} \textbf{19}, 456--
|
||||
|
||||
460 (2022).
|
||||
|
||||
% Add more references as needed
|
||||
|
||||
\end{thebibliography}
|
||||
|
||||
% Figure Legends (if not included with figures)
|
||||
\section*{Figure Legends}
|
||||
|
||||
\textbf{Figure 1 | Figure title.} Comprehensive figure legend describing all panels, experimental conditions, sample sizes, and statistical analyses.
|
||||
|
||||
\textbf{Figure 2 | Second figure title.} Another detailed legend.
|
||||
|
||||
% Extended Data Figures (optional - supplementary figures)
|
||||
\section*{Extended Data}
|
||||
|
||||
\textbf{Extended Data Figure 1 | Supplementary data title.} Description of supplementary figure supporting main findings.
|
||||
|
||||
\end{document}
|
||||
|
||||
% Notes for Authors:
|
||||
% 1. Nature articles are typically ~3,000 words excluding Methods, References, Figure Legends
|
||||
% 2. Use superscript numbered citations (1, 2, 3)
|
||||
% 3. Figures should be high resolution (300+ dpi for photos, 1000 dpi for line art)
|
||||
% 4. Submit figures as separate files (TIFF, EPS, or PDF)
|
||||
% 5. Double-space the manuscript for review
|
||||
% 6. Include line numbers using \linenumbers
|
||||
% 7. Follow Nature's specific author guidelines for your target journal
|
||||
% 8. Methods section can be quite detailed and placed after main text
|
||||
% 9. Check word limits and specific requirements for your Nature family journal
|
||||
|
||||
283
skills/venue-templates/assets/journals/neurips_article.tex
Normal file
283
skills/venue-templates/assets/journals/neurips_article.tex
Normal file
@@ -0,0 +1,283 @@
|
||||
% NeurIPS Conference Paper Template
|
||||
% For submission to Neural Information Processing Systems (NeurIPS)
|
||||
% Last updated: 2024
|
||||
% Note: Use the official neurips_2024.sty file from the conference website
|
||||
|
||||
\documentclass{article}
|
||||
|
||||
% Required packages (neurips_2024.sty provides most formatting)
|
||||
\usepackage{neurips_2024} % Official NeurIPS style file (download from conference site)
|
||||
|
||||
% Recommended packages
|
||||
\usepackage{amsmath}
|
||||
\usepackage{amssymb}
|
||||
\usepackage{amsthm}
|
||||
\usepackage{graphicx}
|
||||
\usepackage{algorithm}
|
||||
\usepackage{algorithmic}
|
||||
\usepackage{hyperref}
|
||||
\usepackage{url}
|
||||
\usepackage{booktabs} % For better tables
|
||||
\usepackage{multirow}
|
||||
\usepackage{microtype} % Improved typography
|
||||
|
||||
% Theorems, lemmas, etc.
|
||||
\newtheorem{theorem}{Theorem}
|
||||
\newtheorem{lemma}{Lemma}
|
||||
\newtheorem{proposition}{Proposition}
|
||||
\newtheorem{corollary}{Corollary}
|
||||
\newtheorem{definition}{Definition}
|
||||
|
||||
% Title and Authors
|
||||
\title{Your Paper Title: Concise and Descriptive \\ (Maximum Two Lines)}
|
||||
|
||||
% Authors - ANONYMIZED for initial submission
|
||||
% For initial submission (double-blind review):
|
||||
\author{
|
||||
Anonymous Authors \\
|
||||
Anonymous Institution(s) \\
|
||||
}
|
||||
|
||||
% For camera-ready version (after acceptance):
|
||||
% \author{
|
||||
% First Author \\
|
||||
% Department of Computer Science \\
|
||||
% University Name \\
|
||||
% City, State, Postal Code \\
|
||||
% \texttt{first.author@university.edu} \\
|
||||
% \And
|
||||
% Second Author \\
|
||||
% Company/Institution Name \\
|
||||
% Address \\
|
||||
% \texttt{second.author@company.com} \\
|
||||
% \And
|
||||
% Third Author \\
|
||||
% Institution \\
|
||||
% \texttt{third.author@institution.edu}
|
||||
% }
|
||||
|
||||
\begin{document}
|
||||
|
||||
\maketitle
|
||||
|
||||
\begin{abstract}
|
||||
Write a concise abstract (150-250 words) summarizing your contributions. The abstract should clearly state: (1) the problem you address, (2) your approach/method, (3) key results/findings, and (4) significance/implications. Make it accessible to a broad machine learning audience.
|
||||
\end{abstract}
|
||||
|
||||
\section{Introduction}
|
||||
\label{sec:introduction}
|
||||
|
||||
Introduce the problem you're addressing and its significance in machine learning or AI. Motivate why this problem is important and challenging.
|
||||
|
||||
\subsection{Background and Motivation}
|
||||
Provide necessary background for understanding your work. Explain the gap in current methods or knowledge.
|
||||
|
||||
\subsection{Contributions}
|
||||
Clearly state your main contributions as a bulleted list:
|
||||
\begin{itemize}
|
||||
\item First contribution: e.g., "We propose a novel architecture for..."
|
||||
\item Second contribution: e.g., "We provide theoretical analysis showing..."
|
||||
\item Third contribution: e.g., "We demonstrate state-of-the-art performance on..."
|
||||
\end{itemize}
|
||||
|
||||
\subsection{Paper Organization}
|
||||
Briefly describe the structure of the remainder of the paper.
|
||||
|
||||
\section{Related Work}
|
||||
\label{sec:related}
|
||||
|
||||
Discuss relevant prior work and how your work differs. Organize by themes or approaches rather than chronologically. Be fair and accurate in describing others' work.
|
||||
|
||||
Cite key papers \cite{lecun2015deep, vaswani2017attention, devlin2019bert} and explain how your work builds upon or differs from them.
|
||||
|
||||
\section{Problem Formulation}
|
||||
\label{sec:problem}
|
||||
|
||||
Formally define the problem you're solving. Include mathematical notation and definitions.
|
||||
|
||||
\subsection{Notation}
|
||||
Define your notation clearly. For example:
|
||||
\begin{itemize}
|
||||
\item $\mathcal{X}$: input space
|
||||
\item $\mathcal{Y}$: output space
|
||||
\item $f: \mathcal{X} \rightarrow \mathcal{Y}$: function to learn
|
||||
\item $\mathcal{D} = \{(x_i, y_i)\}_{i=1}^n$: training dataset
|
||||
\end{itemize}
|
||||
|
||||
\subsection{Objective}
|
||||
State your learning objective formally, e.g.:
|
||||
\begin{equation}
|
||||
\min_{\theta} \mathbb{E}_{(x,y) \sim \mathcal{D}} \left[ \mathcal{L}(f_\theta(x), y) \right]
|
||||
\end{equation}
|
||||
where $\mathcal{L}$ is the loss function and $\theta$ are model parameters.
|
||||
|
||||
\section{Method}
|
||||
\label{sec:method}
|
||||
|
||||
Describe your proposed method in detail. This is the core technical contribution of your paper.
|
||||
|
||||
\subsection{Model Architecture}
|
||||
Describe the architecture of your model with sufficient detail for reproduction. Include figures if helpful.
|
||||
|
||||
\begin{figure}[t]
|
||||
\centering
|
||||
% \includegraphics[width=0.8\textwidth]{architecture.pdf}
|
||||
\caption{Model architecture diagram. Describe the key components and data flow. Use colorblind-safe colors.}
|
||||
\label{fig:architecture}
|
||||
\end{figure}
|
||||
|
||||
\subsection{Training Procedure}
|
||||
Explain how you train the model, including:
|
||||
\begin{algorithm}[t]
|
||||
\caption{Training Algorithm}
|
||||
\label{alg:training}
|
||||
\begin{algorithmic}[1]
|
||||
\STATE \textbf{Input:} Training data $\mathcal{D}$, learning rate $\alpha$
|
||||
\STATE \textbf{Output:} Trained parameters $\theta$
|
||||
\STATE Initialize $\theta$ randomly
|
||||
\FOR{epoch $= 1$ to $T$}
|
||||
\FOR{batch $(x, y)$ in $\mathcal{D}$}
|
||||
\STATE Compute loss: $\mathcal{L} = \mathcal{L}(f_\theta(x), y)$
|
||||
\STATE Update: $\theta \leftarrow \theta - \alpha \nabla_\theta \mathcal{L}$
|
||||
\ENDFOR
|
||||
\ENDFOR
|
||||
\RETURN $\theta$
|
||||
\end{algorithmic}
|
||||
\end{algorithm}
|
||||
|
||||
\subsection{Key Components}
|
||||
Describe key technical innovations or components in detail.
|
||||
|
||||
\section{Theoretical Analysis}
|
||||
\label{sec:theory}
|
||||
|
||||
If applicable, provide theoretical analysis of your method.
|
||||
|
||||
\begin{theorem}
|
||||
\label{thm:main}
|
||||
State your main theoretical result here.
|
||||
\end{theorem}
|
||||
|
||||
\begin{proof}
|
||||
Provide proof or sketch of proof. Full proofs can go in the appendix.
|
||||
\end{proof}
|
||||
|
||||
\section{Experiments}
|
||||
\label{sec:experiments}
|
||||
|
||||
Describe your experimental setup and results.
|
||||
|
||||
\subsection{Experimental Setup}
|
||||
\textbf{Datasets:} Describe datasets used (e.g., ImageNet, CIFAR-10, etc.).
|
||||
|
||||
\textbf{Baselines:} List baseline methods for comparison.
|
||||
|
||||
\textbf{Implementation Details:} Provide implementation details including hyperparameters, hardware, training time.
|
||||
|
||||
\textbf{Evaluation Metrics:} Define metrics used (accuracy, F1, AUC, etc.).
|
||||
|
||||
\subsection{Main Results}
|
||||
Present your main experimental results.
|
||||
|
||||
\begin{table}[t]
|
||||
\centering
|
||||
\caption{Performance comparison on benchmark datasets. Bold indicates best performance. Results reported as mean ± std over 3 runs.}
|
||||
\label{tab:main_results}
|
||||
\begin{tabular}{lcccc}
|
||||
\toprule
|
||||
Method & Dataset 1 & Dataset 2 & Dataset 3 & Average \\
|
||||
\midrule
|
||||
Baseline 1 & 85.3 ± 0.5 & 72.1 ± 0.8 & 90.2 ± 0.3 & 82.5 \\
|
||||
Baseline 2 & 87.2 ± 0.4 & 74.5 ± 0.6 & 91.1 ± 0.5 & 84.3 \\
|
||||
\textbf{Our Method} & \textbf{91.7 ± 0.3} & \textbf{79.8 ± 0.5} & \textbf{94.3 ± 0.2} & \textbf{88.6} \\
|
||||
\bottomrule
|
||||
\end{tabular}
|
||||
\end{table}
|
||||
|
||||
\subsection{Ablation Studies}
|
||||
Conduct ablation studies to understand which components contribute to performance.
|
||||
|
||||
\subsection{Analysis}
|
||||
Provide deeper analysis of results, failure cases, limitations, etc.
|
||||
|
||||
\section{Discussion}
|
||||
\label{sec:discussion}
|
||||
|
||||
Discuss your findings, limitations, and broader implications.
|
||||
|
||||
\subsection{Limitations}
|
||||
Honestly acknowledge limitations of your work.
|
||||
|
||||
\subsection{Broader Impacts}
|
||||
Discuss potential positive and negative societal impacts (required by NeurIPS).
|
||||
|
||||
\section{Conclusion}
|
||||
\label{sec:conclusion}
|
||||
|
||||
Summarize your main contributions and findings. Suggest future research directions.
|
||||
|
||||
% Acknowledgments (add after acceptance, not in submission version)
|
||||
\section*{Acknowledgments}
|
||||
Thank collaborators, funding sources (with grant numbers), and compute resources. Not included in double-blind submission.
|
||||
|
||||
% References
|
||||
\bibliographystyle{plainnat} % or other NeurIPS-compatible style
|
||||
\bibliography{references} % Your .bib file
|
||||
|
||||
% Appendix (optional, unlimited pages)
|
||||
\appendix
|
||||
|
||||
\section{Additional Proofs}
|
||||
\label{app:proofs}
|
||||
|
||||
Provide full proofs of theorems here.
|
||||
|
||||
\section{Additional Experimental Results}
|
||||
\label{app:experiments}
|
||||
|
||||
Include additional experiments, more ablations, qualitative results, etc.
|
||||
|
||||
\section{Hyperparameters}
|
||||
\label{app:hyperparameters}
|
||||
|
||||
List all hyperparameters used in experiments for reproducibility.
|
||||
|
||||
\begin{table}[h]
|
||||
\centering
|
||||
\caption{Hyperparameters used in all experiments}
|
||||
\begin{tabular}{ll}
|
||||
\toprule
|
||||
Hyperparameter & Value \\
|
||||
\midrule
|
||||
Learning rate & 0.001 \\
|
||||
Batch size & 64 \\
|
||||
Optimizer & Adam \\
|
||||
Weight decay & 0.0001 \\
|
||||
Epochs & 100 \\
|
||||
\bottomrule
|
||||
\end{tabular}
|
||||
\end{table}
|
||||
|
||||
\section{Code and Data}
|
||||
\label{app:code}
|
||||
|
||||
Provide links to code repository (anonymized for review, e.g., anonymous GitHub):
|
||||
\begin{itemize}
|
||||
\item Code: \url{https://anonymous.4open.science/r/project-XXXX}
|
||||
\item Data: Available upon request / at [repository]
|
||||
\end{itemize}
|
||||
|
||||
\end{document}
|
||||
|
||||
% Notes for Authors:
|
||||
% 1. Main paper: 8 pages maximum (excluding references and appendix)
|
||||
% 2. References: unlimited pages
|
||||
% 3. Appendix: unlimited pages (reviewed at discretion of reviewers)
|
||||
% 4. Use double-blind anonymization for initial submission
|
||||
% 5. Include broader impact statement
|
||||
% 6. Code submission strongly encouraged (anonymous for review)
|
||||
% 7. Use official neurips_2024.sty file (download from NeurIPS website)
|
||||
% 8. Font: Times, 10pt (enforced by style file)
|
||||
% 9. Figures should be colorblind-friendly
|
||||
% 10. Ensure reproducibility: report seeds, hyperparameters, dataset splits
|
||||
|
||||
317
skills/venue-templates/assets/journals/plos_one.tex
Normal file
317
skills/venue-templates/assets/journals/plos_one.tex
Normal file
@@ -0,0 +1,317 @@
|
||||
% PLOS ONE Article Template
|
||||
% For submission to PLOS ONE and other PLOS journals
|
||||
% Last updated: 2024
|
||||
|
||||
\documentclass[10pt,letterpaper]{article}
|
||||
|
||||
% Packages
|
||||
\usepackage[top=0.85in,left=2.75in,footskip=0.75in]{geometry}
|
||||
\usepackage{amsmath,amssymb}
|
||||
\usepackage{changepage}
|
||||
\usepackage[utf8]{inputenc}
|
||||
\usepackage{textcomp,marvosym}
|
||||
\usepackage{cite}
|
||||
\usepackage{nameref,hyperref}
|
||||
\usepackage[right]{lineno}
|
||||
\usepackage{microtype}
|
||||
\usepackage{graphicx}
|
||||
\usepackage[table]{xcolor}
|
||||
\usepackage{array}
|
||||
\usepackage{authblk}
|
||||
|
||||
% Line numbering
|
||||
\linenumbers
|
||||
|
||||
% Set up authblk for PLOS format
|
||||
\renewcommand\Authfont{\fontsize{12}{14}\selectfont}
|
||||
\renewcommand\Affilfont{\fontsize{9}{11}\selectfont}
|
||||
|
||||
% Title
|
||||
\title{Your Article Title Here: Concise and Descriptive}
|
||||
|
||||
% Authors and Affiliations
|
||||
\author[1]{First Author}
|
||||
\author[1,2]{Second Author}
|
||||
\author[2,$\dagger$]{Third Author}
|
||||
|
||||
\affil[1]{Department of Biology, University Name, City, State, Country}
|
||||
\affil[2]{Institute of Research, Institution Name, City, Country}
|
||||
|
||||
% Corresponding author
|
||||
\affil[$\dagger$]{Corresponding author. E-mail: [email protected]}
|
||||
|
||||
\date{}
|
||||
|
||||
\begin{document}
|
||||
|
||||
\maketitle
|
||||
|
||||
% Abstract
|
||||
\begin{abstract}
|
||||
\noindent
|
||||
Write a structured or unstructured abstract of 250-300 words. The abstract should be accessible to a broad readership and should clearly state: (1) background/rationale, (2) objectives, (3) methods, (4) principal findings with key data, and (5) conclusions and significance. Do not include citations in the abstract.
|
||||
\end{abstract}
|
||||
|
||||
% Introduction
|
||||
\section*{Introduction}
|
||||
|
||||
Provide background and context for your study. The introduction should:
|
||||
\begin{itemize}
|
||||
\item Present the rationale for your study
|
||||
\item Clearly state what is currently known about the topic
|
||||
\item Identify the knowledge gap your study addresses
|
||||
\item State your research objectives or hypotheses
|
||||
\item Explain the significance of the research
|
||||
\end{itemize}
|
||||
|
||||
Review relevant literature \cite{smith2023,jones2022}, setting your work in context.
|
||||
|
||||
State your main research question or objective at the end of the introduction.
|
||||
|
||||
% Materials and Methods
|
||||
\section*{Materials and Methods}
|
||||
|
||||
Provide sufficient detail to allow reproduction of your work.
|
||||
|
||||
\subsection*{Study Design}
|
||||
Describe the overall study design (e.g., prospective cohort, randomized controlled trial, observational study, etc.).
|
||||
|
||||
\subsection*{Participants/Samples}
|
||||
Describe your study population, sample collection, or experimental subjects:
|
||||
\begin{itemize}
|
||||
\item Sample size and how it was determined (power analysis)
|
||||
\item Inclusion and exclusion criteria
|
||||
\item Demographic information
|
||||
\item For animal studies: species, strain, age, sex, housing conditions
|
||||
\end{itemize}
|
||||
|
||||
\subsection*{Procedures}
|
||||
Detail all experimental procedures, measurements, and interventions. Include:
|
||||
\begin{itemize}
|
||||
\item Equipment and reagents (with manufacturer, catalog numbers)
|
||||
\item Protocols and procedures (step-by-step if novel)
|
||||
\item Controls used
|
||||
\item Blinding and randomization (if applicable)
|
||||
\end{itemize}
|
||||
|
||||
\subsection*{Data Collection}
|
||||
Describe how data were collected, including instruments, assays, and measurements.
|
||||
|
||||
\subsection*{Statistical Analysis}
|
||||
Clearly describe statistical methods used:
|
||||
\begin{itemize}
|
||||
\item Software and version (e.g., R 4.3.0, Python 3.9 with scipy 1.9.0)
|
||||
\item Statistical tests performed (e.g., t-tests, ANOVA, regression)
|
||||
\item Significance level ($\alpha$, typically 0.05)
|
||||
\item Corrections for multiple testing
|
||||
\item Sample size justification
|
||||
\end{itemize}
|
||||
|
||||
\subsection*{Ethical Approval}
|
||||
Include relevant ethical approval statements:
|
||||
\begin{itemize}
|
||||
\item Human subjects: IRB approval, protocol number, consent procedures
|
||||
\item Animal research: IACUC approval, protocol number, welfare considerations
|
||||
\item Field studies: Permits and permissions
|
||||
\end{itemize}
|
||||
|
||||
Example: "This study was approved by the Institutional Review Board of University Name (Protocol \#12345). All participants provided written informed consent."
|
||||
|
||||
% Results
|
||||
\section*{Results}
|
||||
|
||||
Present your findings in a logical sequence. Refer to figures and tables as you describe results. Do not interpret results in this section (save for Discussion).
|
||||
|
||||
\subsection*{First Major Finding}
|
||||
Describe your first key result. Statistical results should include effect sizes and confidence intervals in addition to p-values.
|
||||
|
||||
As shown in Figure~\ref{fig:results1}, we observed a significant increase in [outcome variable] (mean $\pm$ SD: 45.2 $\pm$ 8.3 vs. 32.1 $\pm$ 6.9; t = 7.42, df = 48, p < 0.001).
|
||||
|
||||
\begin{figure}[!ht]
|
||||
\centering
|
||||
% \includegraphics[width=0.75\textwidth]{figure1.png}
|
||||
\caption{{\bf Figure 1. Title of first figure.}
|
||||
Detailed figure legend describing what is shown. Include: (A) Description of panel A. (B) Description of panel B. Sample sizes (n), error bars represent [SD, SEM, 95\% CI], and statistical significance indicated by asterisks (* p < 0.05, ** p < 0.01, *** p < 0.001). Statistical test used should be stated.}
|
||||
\label{fig:results1}
|
||||
\end{figure}
|
||||
|
||||
\subsection*{Second Major Finding}
|
||||
Describe your second key result, referencing Table~\ref{tab:results1}.
|
||||
|
||||
\begin{table}[!ht]
|
||||
\centering
|
||||
\caption{{\bf Table 1. Title of table.}}
|
||||
\label{tab:results1}
|
||||
\begin{tabular}{lccc}
|
||||
\hline
|
||||
\textbf{Condition} & \textbf{Measurement 1} & \textbf{Measurement 2} & \textbf{p-value} \\
|
||||
\hline
|
||||
Control & 25.3 $\pm$ 3.1 & 48.2 $\pm$ 5.4 & -- \\
|
||||
Treatment A & 32.7 $\pm$ 2.8 & 55.1 $\pm$ 4.9 & 0.003 \\
|
||||
Treatment B & 41.2 $\pm$ 3.5 & 62.8 $\pm$ 6.2 & < 0.001 \\
|
||||
\hline
|
||||
\end{tabular}
|
||||
\begin{flushleft}
|
||||
Values shown as mean $\pm$ standard deviation (n = 20 per group). P-values from one-way ANOVA with Tukey's post-hoc test comparing to control.
|
||||
\end{flushleft}
|
||||
\end{table}
|
||||
|
||||
\subsection*{Additional Results}
|
||||
Present additional findings as needed.
|
||||
|
||||
% Discussion
|
||||
\section*{Discussion}
|
||||
|
||||
Interpret your results and place them in the context of existing literature.
|
||||
|
||||
\subsection*{Principal Findings}
|
||||
Summarize your main findings concisely.
|
||||
|
||||
\subsection*{Interpretation}
|
||||
Interpret your findings and explain their significance. How do they advance understanding of the topic? Compare and contrast with previous studies \cite{brown2021,williams2020}.
|
||||
|
||||
\subsection*{Strengths and Limitations}
|
||||
Discuss both strengths and limitations of your study honestly:
|
||||
|
||||
\textbf{Strengths:}
|
||||
\begin{itemize}
|
||||
\item Large sample size with adequate statistical power
|
||||
\item Rigorous methodology with appropriate controls
|
||||
\item Novel approach or finding
|
||||
\end{itemize}
|
||||
|
||||
\textbf{Limitations:}
|
||||
\begin{itemize}
|
||||
\item Cross-sectional design limits causal inference
|
||||
\item Generalizability may be limited to [specific population]
|
||||
\item Potential confounding variables not measured
|
||||
\end{itemize}
|
||||
|
||||
\subsection*{Implications}
|
||||
Discuss the practical or theoretical implications of your findings.
|
||||
|
||||
\subsection*{Future Directions}
|
||||
Suggest directions for future research.
|
||||
|
||||
% Conclusions
|
||||
\section*{Conclusions}
|
||||
|
||||
Provide a concise conclusion summarizing the main findings and their significance. Avoid repeating the abstract.
|
||||
|
||||
% Acknowledgments
|
||||
\section*{Acknowledgments}
|
||||
|
||||
Acknowledge individuals who contributed but do not meet authorship criteria, technical assistance, and writing assistance. Example: "We thank Dr. Jane Doe for technical assistance with microscopy and Dr. John Smith for helpful discussions."
|
||||
|
||||
% References
|
||||
\section*{References}
|
||||
|
||||
% Using BibTeX
|
||||
\bibliographystyle{plos2015}
|
||||
\bibliography{references}
|
||||
|
||||
% Or manually formatted (Vancouver style, numbered):
|
||||
\begin{thebibliography}{99}
|
||||
|
||||
\bibitem{smith2023}
|
||||
Smith JD, Johnson ML, Williams KR. Title of article. Journal Abbrev. 2023;45(3):301-318. doi:10.1371/journal.pone.1234567.
|
||||
|
||||
\bibitem{jones2022}
|
||||
Jones AB, Brown CD. Another article title. PLoS ONE. 2022;17(8):e0234567. doi:10.1371/journal.pone.0234567.
|
||||
|
||||
\bibitem{brown2021}
|
||||
Brown EF, Davis GH, Wilson IJ, Taylor JK. Comprehensive study title. Nat Commun. 2021;12:1234. doi:10.1038/s41467-021-12345-6.
|
||||
|
||||
\bibitem{williams2020}
|
||||
Williams LM, Anderson NO. Previous work on topic. Science. 2020;368(6489):456-460. doi:10.1126/science.abc1234.
|
||||
|
||||
\end{thebibliography}
|
||||
|
||||
% Supporting Information
|
||||
\section*{Supporting Information}
|
||||
|
||||
List all supporting information files (captions provided separately during submission):
|
||||
|
||||
\paragraph{S1 Fig.}
|
||||
\textbf{Title of supplementary figure 1.} Brief description.
|
||||
|
||||
\paragraph{S2 Fig.}
|
||||
\textbf{Title of supplementary figure 2.} Brief description.
|
||||
|
||||
\paragraph{S1 Table.}
|
||||
\textbf{Title of supplementary table 1.} Brief description.
|
||||
|
||||
\paragraph{S1 Dataset.}
|
||||
\textbf{Raw data.} Complete dataset used in analysis (CSV format).
|
||||
|
||||
\paragraph{S1 File.}
|
||||
\textbf{Supplementary methods.} Additional methodological details.
|
||||
|
||||
% Author Contributions (CRediT taxonomy recommended)
|
||||
\section*{Author Contributions}
|
||||
|
||||
Use CRediT (Contributor Roles Taxonomy):
|
||||
\begin{itemize}
|
||||
\item \textbf{Conceptualization:} FA, SA
|
||||
\item \textbf{Data curation:} FA
|
||||
\item \textbf{Formal analysis:} FA, SA
|
||||
\item \textbf{Funding acquisition:} TA
|
||||
\item \textbf{Investigation:} FA, SA
|
||||
\item \textbf{Methodology:} FA, SA, TA
|
||||
\item \textbf{Project administration:} TA
|
||||
\item \textbf{Resources:} TA
|
||||
\item \textbf{Software:} FA
|
||||
\item \textbf{Supervision:} TA
|
||||
\item \textbf{Validation:} FA, SA
|
||||
\item \textbf{Visualization:} FA
|
||||
\item \textbf{Writing – original draft:} FA
|
||||
\item \textbf{Writing – review \& editing:} FA, SA, TA
|
||||
\end{itemize}
|
||||
|
||||
(FA = First Author, SA = Second Author, TA = Third Author)
|
||||
|
||||
% Data Availability Statement (REQUIRED)
|
||||
\section*{Data Availability}
|
||||
|
||||
Choose one of the following:
|
||||
|
||||
\textbf{Option 1 (Public repository):}
|
||||
All data are available in the [repository name] repository at [URL/DOI].
|
||||
|
||||
\textbf{Option 2 (Supporting Information):}
|
||||
All relevant data are within the paper and its Supporting Information files.
|
||||
|
||||
\textbf{Option 3 (Available on request):}
|
||||
Data cannot be shared publicly because of [reason]. Data are available from the [institution/contact] (contact via [email]) for researchers who meet the criteria for access to confidential data.
|
||||
|
||||
\textbf{Option 4 (Third-party):}
|
||||
Data are available from [third party] (contact: [details]) for researchers who meet criteria for access.
|
||||
|
||||
% Funding Statement (REQUIRED)
|
||||
\section*{Funding}
|
||||
|
||||
State all funding sources including grant numbers. If no funding, state "The authors received no specific funding for this work."
|
||||
|
||||
Example: "This work was supported by the National Science Foundation (NSF) [grant number 123456 to TA] and the National Institutes of Health (NIH) [grant number R01-234567 to TA]. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript."
|
||||
|
||||
% Competing Interests (REQUIRED)
|
||||
\section*{Competing Interests}
|
||||
|
||||
Declare any financial or non-financial competing interests. If none, state: "The authors have declared that no competing interests exist."
|
||||
|
||||
If competing interests exist, declare them explicitly: "Author TA is a consultant for Company X. This does not alter our adherence to PLOS ONE policies on sharing data and materials."
|
||||
|
||||
\end{document}
|
||||
|
||||
% Notes for Authors:
|
||||
% 1. PLOS ONE has no length limit - be concise but thorough
|
||||
% 2. Use Vancouver style for citations [1], [2], [3]
|
||||
% 3. Figures: TIFF or EPS format, 300-600 dpi
|
||||
% 4. All data must be made available (data availability statement required)
|
||||
% 5. Include line numbers for review
|
||||
% 6. PLOS ONE focuses on scientific rigor, not novelty or impact
|
||||
% 7. Reporting guidelines encouraged (CONSORT, STROBE, PRISMA, etc.)
|
||||
% 8. Ethical approval required for human/animal studies
|
||||
% 9. All authors must agree to submission
|
||||
% 10. Submit via PLOS online submission system
|
||||
|
||||
311
skills/venue-templates/assets/posters/beamerposter_academic.tex
Normal file
311
skills/venue-templates/assets/posters/beamerposter_academic.tex
Normal file
@@ -0,0 +1,311 @@
|
||||
% Academic Research Poster Template using beamerposter
|
||||
% For conference presentations
|
||||
% Last updated: 2024
|
||||
|
||||
\documentclass[final]{beamer}
|
||||
|
||||
% Poster size and scale
|
||||
% Common sizes: a0, a1, a2, a3, a4
|
||||
% Custom size: size=custom,width=XX,height=YY
|
||||
\usepackage[size=a0,scale=1.24,orientation=portrait]{beamerposter}
|
||||
|
||||
% Packages
|
||||
\usepackage[utf8]{inputenc}
|
||||
\usepackage{amsmath,amsthm,amssymb,latexsym}
|
||||
\usepackage{graphicx}
|
||||
\usepackage{booktabs,array}
|
||||
\usepackage{multirow}
|
||||
\usepackage{qrcode} % For QR codes
|
||||
\usepackage{tikz}
|
||||
\usepackage{lipsum} % For placeholder text (remove in final version)
|
||||
|
||||
% Beamer theme
|
||||
\usetheme{Berlin}
|
||||
% Other themes: default, AnnArbor, Antibes, Bergen, Berkeley, Berlin, Boadilla, CambridgeUS, Copenhagen, Darmstadt, Dresden, Frankfurt, Goettingen, Hannover, Ilmenau, JuanLesPins, Luebeck, Madrid, Malmoe, Marburg, Montpellier, PaloAlto, Pittsburgh, Rochester, Singapore, Szeged, Warsaw
|
||||
|
||||
% Color theme
|
||||
\usecolortheme{seahorse}
|
||||
% Other color themes: default, albatross, beaver, beetle, crane, dolphin, dove, fly, lily, orchid, rose, seagull, seahorse, whale, wolverine
|
||||
|
||||
% Custom colors (Okabe-Ito colorblind-safe palette)
|
||||
\definecolor{OIorange}{RGB}{230,159,0}
|
||||
\definecolor{OIblue}{RGB}{86,180,233}
|
||||
\definecolor{OIgreen}{RGB}{0,158,115}
|
||||
\definecolor{OIyellow}{RGB}{240,228,66}
|
||||
\definecolor{OIdarkblue}{RGB}{0,114,178}
|
||||
\definecolor{OIvermillion}{RGB}{213,94,0}
|
||||
\definecolor{OIpurple}{RGB}{204,121,167}
|
||||
|
||||
% Set custom colors
|
||||
\setbeamercolor{block title}{fg=white,bg=OIdarkblue}
|
||||
\setbeamercolor{block body}{fg=black,bg=white}
|
||||
\setbeamercolor{block alerted title}{fg=white,bg=OIvermillion}
|
||||
\setbeamercolor{block alerted body}{fg=black,bg=white}
|
||||
|
||||
% Fonts
|
||||
\setbeamerfont{title}{size=\VERYHuge,series=\bfseries}
|
||||
\setbeamerfont{author}{size=\Large}
|
||||
\setbeamerfont{institute}{size=\large}
|
||||
\setbeamerfont{block title}{size=\large,series=\bfseries}
|
||||
\setbeamerfont{block body}{size=\normalsize}
|
||||
|
||||
% Remove navigation symbols
|
||||
\setbeamertemplate{navigation symbols}{}
|
||||
|
||||
% Title, authors, and affiliations
|
||||
\title{Your Research Title Here:\\A Concise and Descriptive Title}
|
||||
|
||||
\author{First Author\inst{1}, Second Author\inst{1,2}, Third Author\inst{2}}
|
||||
|
||||
\institute[shortinst]{
|
||||
\inst{1} Department of Science, University Name, City, State, Country\\
|
||||
\inst{2} Institute of Research, Institution Name, City, Country
|
||||
}
|
||||
|
||||
% Footer
|
||||
\setbeamertemplate{footline}{
|
||||
\leavevmode%
|
||||
\hbox{%
|
||||
\begin{beamercolorbox}[wd=.33\paperwidth,ht=4ex,dp=2ex,left]{author in head/foot}%
|
||||
\hspace{1em}\usebeamerfont{author in head/foot}Contact: [email protected]
|
||||
\end{beamercolorbox}%
|
||||
\begin{beamercolorbox}[wd=.34\paperwidth,ht=4ex,dp=2ex,center]{title in head/foot}%
|
||||
\usebeamerfont{title in head/foot}Conference Name 2024
|
||||
\end{beamercolorbox}%
|
||||
\begin{beamercolorbox}[wd=.33\paperwidth,ht=4ex,dp=2ex,right]{date in head/foot}%
|
||||
\usebeamerfont{date in head/foot}University Logo\hspace{1em}
|
||||
\end{beamercolorbox}}%
|
||||
\vskip0pt%
|
||||
}
|
||||
|
||||
\begin{document}
|
||||
|
||||
\begin{frame}[t]
|
||||
\begin{columns}[t]
|
||||
|
||||
% Left Column
|
||||
\begin{column}{.48\textwidth}
|
||||
|
||||
% Introduction/Background
|
||||
\begin{block}{Introduction}
|
||||
\begin{itemize}
|
||||
\item \textbf{Background:} Provide context for your research. What is the broader problem or area of study?
|
||||
\item \textbf{Gap:} What is currently unknown or inadequately addressed?
|
||||
\item \textbf{Objective:} Clearly state your research question or hypothesis
|
||||
\item \textbf{Significance:} Why does this work matter?
|
||||
\end{itemize}
|
||||
|
||||
\vspace{0.5cm}
|
||||
\textbf{Hypothesis:} State your main hypothesis clearly in one sentence.
|
||||
\end{block}
|
||||
|
||||
\vspace{1cm}
|
||||
|
||||
% Methods
|
||||
\begin{block}{Methods}
|
||||
|
||||
\textbf{Study Design:} Brief description of overall approach.
|
||||
|
||||
\vspace{0.5cm}
|
||||
|
||||
\textbf{Participants/Samples:}
|
||||
\begin{itemize}
|
||||
\item Sample size: n = XX
|
||||
\item Key characteristics
|
||||
\item Inclusion/exclusion criteria
|
||||
\end{itemize}
|
||||
|
||||
\vspace{0.5cm}
|
||||
|
||||
\textbf{Procedures:}
|
||||
\begin{enumerate}
|
||||
\item Data collection procedure
|
||||
\item Experimental intervention or measurement
|
||||
\item Analysis approach
|
||||
\end{enumerate}
|
||||
|
||||
\vspace{0.5cm}
|
||||
|
||||
% Optional: Methods flowchart
|
||||
\begin{center}
|
||||
\begin{tikzpicture}[node distance=1.5cm, auto,
|
||||
box/.style={rectangle, draw, fill=OIblue!20, text width=8cm, text centered, minimum height=1cm}]
|
||||
\node [box] (step1) {Step 1: Participant Recruitment};
|
||||
\node [box, below of=step1] (step2) {Step 2: Baseline Assessment};
|
||||
\node [box, below of=step2] (step3) {Step 3: Intervention};
|
||||
\node [box, below of=step3] (step4) {Step 4: Follow-up Assessment};
|
||||
\node [box, below of=step4] (step5) {Step 5: Data Analysis};
|
||||
|
||||
\draw [->] (step1) -- (step2);
|
||||
\draw [->] (step2) -- (step3);
|
||||
\draw [->] (step3) -- (step4);
|
||||
\draw [->] (step4) -- (step5);
|
||||
\end{tikzpicture}
|
||||
\end{center}
|
||||
|
||||
\textbf{Statistical Analysis:}
|
||||
\begin{itemize}
|
||||
\item Statistical test used (e.g., t-test, ANOVA, regression)
|
||||
\item Software: R 4.3.0, Python 3.9
|
||||
\item Significance level: $\alpha = 0.05$
|
||||
\end{itemize}
|
||||
|
||||
\end{block}
|
||||
|
||||
\end{column}
|
||||
|
||||
% Right Column
|
||||
\begin{column}{.48\textwidth}
|
||||
|
||||
% Results
|
||||
\begin{block}{Results}
|
||||
|
||||
\textbf{Finding 1: Main Result}
|
||||
|
||||
\vspace{0.5cm}
|
||||
|
||||
% Figure 1
|
||||
\begin{figure}
|
||||
\centering
|
||||
% \includegraphics[width=0.9\textwidth]{figure1.pdf}
|
||||
\caption{Figure 1. Main result showing significant effect. Error bars represent standard deviation. * p < 0.05, ** p < 0.01, *** p < 0.001.}
|
||||
\end{figure}
|
||||
|
||||
\vspace{0.5cm}
|
||||
|
||||
\textbf{Finding 2: Secondary Analysis}
|
||||
|
||||
\vspace{0.5cm}
|
||||
|
||||
% Table or second figure
|
||||
\begin{table}
|
||||
\centering
|
||||
\caption{Summary of key results}
|
||||
\begin{tabular}{lcccc}
|
||||
\toprule
|
||||
\textbf{Condition} & \textbf{Mean} & \textbf{SD} & \textbf{n} & \textbf{p-value} \\
|
||||
\midrule
|
||||
Control & 25.3 & 3.1 & 30 & -- \\
|
||||
Treatment A & 32.7 & 2.8 & 30 & 0.003 \\
|
||||
Treatment B & 41.2 & 3.5 & 30 & < 0.001 \\
|
||||
\bottomrule
|
||||
\end{tabular}
|
||||
\end{table}
|
||||
|
||||
\vspace{0.5cm}
|
||||
|
||||
\textbf{Finding 3: Additional Observation}
|
||||
|
||||
Describe third key finding with reference to supporting data.
|
||||
|
||||
\end{block}
|
||||
|
||||
\vspace{1cm}
|
||||
|
||||
% Discussion/Conclusions
|
||||
\begin{block}{Discussion \& Conclusions}
|
||||
|
||||
\textbf{Main Findings:}
|
||||
\begin{itemize}
|
||||
\item Summary of first key result
|
||||
\item Summary of second key result
|
||||
\item Summary of third key result
|
||||
\end{itemize}
|
||||
|
||||
\vspace{0.5cm}
|
||||
|
||||
\textbf{Interpretation:}
|
||||
\begin{itemize}
|
||||
\item How do these findings advance understanding?
|
||||
\item How do they compare to previous work?
|
||||
\item What are the mechanisms or explanations?
|
||||
\end{itemize}
|
||||
|
||||
\vspace{0.5cm}
|
||||
|
||||
\textbf{Limitations:}
|
||||
\begin{itemize}
|
||||
\item Acknowledge key limitations honestly
|
||||
\item Discuss how they might affect interpretation
|
||||
\end{itemize}
|
||||
|
||||
\vspace{0.5cm}
|
||||
|
||||
\textbf{Future Directions:}
|
||||
\begin{itemize}
|
||||
\item Next steps for research
|
||||
\item Potential applications
|
||||
\end{itemize}
|
||||
|
||||
\vspace{0.5cm}
|
||||
|
||||
\begin{alertblock}{Key Takeaway}
|
||||
\textbf{One-sentence summary of most important finding or implication.}
|
||||
\end{alertblock}
|
||||
|
||||
\end{block}
|
||||
|
||||
\vspace{1cm}
|
||||
|
||||
% References and QR Code
|
||||
\begin{block}{References \& Contact}
|
||||
|
||||
\begin{minipage}[t]{0.65\textwidth}
|
||||
\small
|
||||
\textbf{Selected References:}
|
||||
\begin{enumerate}
|
||||
\item Smith et al. (2023). \textit{Journal Name}, 45:123-130.
|
||||
\item Jones \& Brown (2022). \textit{Another Journal}, 12:456-467.
|
||||
\item Williams et al. (2021). \textit{Third Journal}, 8:789-801.
|
||||
\end{enumerate}
|
||||
|
||||
\vspace{0.3cm}
|
||||
|
||||
\textbf{Acknowledgments:} Funding from [Agency] Grant \#12345. Thanks to [collaborators].
|
||||
\end{minipage}
|
||||
\hfill
|
||||
\begin{minipage}[t]{0.3\textwidth}
|
||||
\begin{center}
|
||||
\qrcode[height=3cm]{https://yourlab.university.edu/paper}\\
|
||||
\small Scan for full paper\\and supplementary materials
|
||||
\end{center}
|
||||
\end{minipage}
|
||||
|
||||
\end{block}
|
||||
|
||||
\end{column}
|
||||
|
||||
\end{columns}
|
||||
\end{frame}
|
||||
|
||||
\end{document}
|
||||
|
||||
% Notes for Poster Design:
|
||||
% 1. Font sizes (for A0 poster):
|
||||
% - Title: 80-100pt
|
||||
% - Authors: 60pt
|
||||
% - Section headers: 50-60pt
|
||||
% - Body text: 32-36pt (set by beamerposter scale)
|
||||
% - Captions: 28-32pt
|
||||
%
|
||||
% 2. Use colorblind-safe colors (Okabe-Ito palette provided)
|
||||
%
|
||||
% 3. Keep text minimal - use bullets, not paragraphs
|
||||
%
|
||||
% 4. Make figures large and clear
|
||||
%
|
||||
% 5. Use white space effectively - don't crowd
|
||||
%
|
||||
% 6. Test readability from 6 feet (2 meters) away
|
||||
%
|
||||
% 7. Include QR code linking to paper, lab website, or supplementary materials
|
||||
%
|
||||
% 8. Print at professional print shop (FedEx Office, university print center)
|
||||
%
|
||||
% 9. Common poster sizes:
|
||||
% - A0: 841 × 1189 mm (33.1 × 46.8 in)
|
||||
% - 36" × 48" (914 × 1219 mm)
|
||||
% - Check conference requirements!
|
||||
%
|
||||
% 10. Compile with: pdflatex beamerposter_academic.tex
|
||||
|
||||
Reference in New Issue
Block a user